Uses of Interface
org.openscience.cdk.interfaces.IBond

Packages that use IBond

Package	Description
org.openscience.cdk.interfaces
org.openscience.cdk.isomorphism.matchers
org.openscience.cdk.libio.cml

Uses of IBond in org.openscience.cdk.interfaces

Methods in org.openscience.cdk.interfaces that return IBond

Modifier and Type	Method and Description
IBond	IBond.clone() Returns a deep clone of this IChemObject.
IBond	IAtomContainer.getBond(IAtom atom1, IAtom atom2) Returns the bond that connects the two given atoms.
IBond	IAtomContainer.getBond(int idx) Get the bond at the specified idx, the index should be in the range 0 ≤ idx < IAtomContainer.getBondCount().
IBond[]	IDoubleBondStereochemistry.getBonds() Returns an array of ligand bonds around the double bond.
IBond	IRing.getNextBond(IBond bond, IAtom atom) Returns the next bond in order, relative to a given bond and atom.
IBond	IDoubleBondStereochemistry.getStereoBond() IBond that is the stereo center.
IBond	IChemObjectBuilder.newBond() Create a new bond using the default constructor.
IBond	IAtomContainer.removeBond(IAtom atom1, IAtom atom2) Removes the bond that connects the two given atoms.
IBond	IAtomContainer.removeBond(int position) Removes the bond at the given position from the AtomContainer.

Methods in org.openscience.cdk.interfaces that return types with arguments of type IBond

Modifier and Type	Method and Description
Iterable<IBond>	IAtomContainer.bonds() Returns an Iterable for looping over all bonds in this container.
Iterable<IBond>	IAtom.bonds() Returns the bonds connected to this atom.
List<IBond>	IAtomContainer.getConnectedBondsList(IAtom atom) Returns the bonds connected connected to the specified atom.

Methods in org.openscience.cdk.interfaces with parameters of type IBond

Modifier and Type	Method and Description
void	IAtomContainer.addBond(IBond bond) Adds a Bond to this AtomContainer.
boolean	IAtomContainer.contains(IBond bond) True, if the AtomContainer contains the given bond object.
int	IAtomContainer.getBondNumber(IBond bond) Deprecated. use IAtomContainer.indexOf(IBond)
IBond	IRing.getNextBond(IBond bond, IAtom atom) Returns the next bond in order, relative to a given bond and atom.
IRingSet	IRingSet.getRings(IBond bond) Returns a vector of all rings that this bond is part of.
int	IAtomContainer.indexOf(IBond bond) Access the storage index of a bond.
boolean	IBond.isConnectedTo(IBond bond) Checks whether a bond is connected to another one.
void	IAtomContainer.removeBond(IBond bond) Removes the bond from this container.
void	IAtomContainer.setBonds(IBond[] bonds) Sets the array of bonds of this AtomContainer.

Method parameters in org.openscience.cdk.interfaces with type arguments of type IBond

Modifier and Type	Method and Description
ITetrahedralChirality	ITetrahedralChirality.map(Map<IAtom,IAtom> atoms, Map<IBond,IBond> bonds) Map the atoms/bonds in this instance to a new stereo element using the provided atom/bond mapping.
ITetrahedralChirality	ITetrahedralChirality.map(Map<IAtom,IAtom> atoms, Map<IBond,IBond> bonds) Map the atoms/bonds in this instance to a new stereo element using the provided atom/bond mapping.
IStereoElement	IStereoElement.map(Map<IAtom,IAtom> atoms, Map<IBond,IBond> bonds) Map the atoms/bonds in this instance to a new stereo element using the provided atom/bond mapping.
IStereoElement	IStereoElement.map(Map<IAtom,IAtom> atoms, Map<IBond,IBond> bonds) Map the atoms/bonds in this instance to a new stereo element using the provided atom/bond mapping.
IDoubleBondStereochemistry	IDoubleBondStereochemistry.map(Map<IAtom,IAtom> atoms, Map<IBond,IBond> bonds) Map the atoms/bonds in this instance to a new stereo element using the provided atom/bond mapping.
IDoubleBondStereochemistry	IDoubleBondStereochemistry.map(Map<IAtom,IAtom> atoms, Map<IBond,IBond> bonds) Map the atoms/bonds in this instance to a new stereo element using the provided atom/bond mapping.

Uses of IBond in org.openscience.cdk.isomorphism.matchers

Subinterfaces of IBond in org.openscience.cdk.isomorphism.matchers

Modifier and Type	Interface and Description
interface	IQueryBond Defines the abililty to be matched against IBond's.

Methods in org.openscience.cdk.isomorphism.matchers with parameters of type IBond

Modifier and Type	Method and Description
boolean	IQueryBond.matches(IBond bond) Returns true of the given bond matches this IQueryBond.

Uses of IBond in org.openscience.cdk.libio.cml

Methods in org.openscience.cdk.libio.cml with parameters of type IBond

Modifier and Type	Method and Description
void	ICMLCustomizer.customize(IBond bond, Object nodeToAdd) Customized the nodeToAdd for the given IBond.