Deprecated API

Contents

• Deprecated Methods

Deprecated Methods

Method and Description
org.openscience.cdk.interfaces.IAtomContainer.getAtomNumber(IAtom) use IAtomContainer.indexOf(IAtom)
org.openscience.cdk.interfaces.IAtomContainer.getBondNumber(IAtom, IAtom) use IAtomContainer.indexOf(IBond)
org.openscience.cdk.interfaces.IAtomContainer.getBondNumber(IBond) use IAtomContainer.indexOf(IBond)
org.openscience.cdk.interfaces.IBond.getConnectedAtom(IAtom) use the method IBond.getOther(IAtom)
org.openscience.cdk.interfaces.IAtomContainer.getConnectedAtomsCount(IAtom) use IAtomContainer.getConnectedBondsCount(IAtom)
org.openscience.cdk.interfaces.IAtomContainer.getFirstAtom() use IAtomContainer.getAtom(int)
org.openscience.cdk.interfaces.IAtomContainer.getLastAtom() use IAtomContainer.getAtom(int)
org.openscience.cdk.interfaces.IAtomContainer.getLonePairNumber(ILonePair) use IAtomContainer.indexOf(ILonePair)
org.openscience.cdk.interfaces.IAtomContainer.getSingleElectronNumber(ISingleElectron) use IAtomContainer.indexOf(ISingleElectron)
org.openscience.cdk.interfaces.IAtom.getStereoParity() use IStereoElements for storing stereochemistry
org.openscience.cdk.interfaces.IAtomContainer.removeAtomAndConnectedElectronContainers(IAtom) Method has be renamed IAtomContainer.removeAtom(IAtom).
org.openscience.cdk.interfaces.IAtom.setStereoParity(Integer) use IStereoElements for storing stereochemistry