Package org.apache.beam.sdk.io.gcp.healthcare

Provides an API for reading from and writing to Google Cloud Datastore over different versions of the Cloud Datastore Client libraries.

Interface Summary

Interface	Description
HealthcareApiClient	Defines a client to communicate with the GCP HCLS API (version v1).

Class Summary

Class	Description
DicomIO	The DicomIO connectors allows Beam pipelines to make calls to the Dicom API of the Google Cloud Healthcare API (https://cloud.google.com/healthcare/docs/how-tos#dicom-guide).
DicomIO.ReadStudyMetadata	This class makes a call to the retrieve metadata endpoint (https://cloud.google.com/healthcare/docs/how-tos/dicomweb#retrieving_metadata).
DicomIO.ReadStudyMetadata.Result
FhirBundleParameter	FhirBundleParameter represents a FHIR bundle in JSON format to be executed on a FHIR store.
FhirBundleResponse
FhirIO	FhirIO provides an API for reading and writing resources to Google Cloud Healthcare Fhir API.
FhirIO.Deidentify	Deidentify FHIR resources from a FHIR store to a destination FHIR store.
FhirIO.Deidentify.DeidentifyFn	A function that schedules a deidentify operation and monitors the status.
FhirIO.ExecuteBundles	The type Execute bundles.
FhirIO.ExecuteBundlesResult	ExecuteBundlesResult contains both successfully executed bundles and information help debugging failed executions (eg metadata & error msgs).
FhirIO.Export	Export FHIR resources from a FHIR store to new line delimited json files on GCS or BigQuery.
FhirIO.Export.ExportResourcesFn	A function that schedules an export operation and monitors the status.
FhirIO.Import	Writes each bundle of elements to a new-line delimited JSON file on GCS and issues a fhirStores.import Request for that file.
FhirIO.Read	The type Read.
FhirIO.Read.Result	The type Result.
FhirIO.Search<T>	The type Search.
FhirIO.Search.Result
FhirIO.Write	The type Write.
FhirIO.Write.AbstractResult
FhirIO.Write.Result	The type Result.
FhirIOPatientEverything	The type FhirIOPatientEverything for querying a FHIR Patient resource's compartment.
FhirIOPatientEverything.PatientEverythingParameter	PatientEverythingParameter defines required attributes for a FHIR GetPatientEverything request in FhirIOPatientEverything.
FhirIOPatientEverything.Result	The Result for a FhirIOPatientEverything request.
FhirSearchParameter<T>	FhirSearchParameter represents the query parameters for a FHIR search request, used as a parameter for FhirIO.Search.
FhirSearchParameterCoder<T>	FhirSearchParameterCoder is the coder for FhirSearchParameter, which takes a coder for type T.
HealthcareIOError<T>	Class for capturing errors on IO operations on Google Cloud Healthcare APIs resources.
HealthcareIOErrorCoder<T>
HealthcareIOErrorToTableRow<T>	Convenience transform to write dead-letter HealthcareIOErrors to BigQuery TableRows.
HL7v2IO	HL7v2IO provides an API for reading from and writing to Google Cloud Healthcare HL7v2 API.
HL7v2IO.HL7v2Read	The type Read that reads HL7v2 message contents given a PCollection of HL7v2ReadParameter.
HL7v2IO.HL7v2Read.FetchHL7v2Message	PTransform to fetch a message from an Google Cloud Healthcare HL7v2 store based on msgID.
HL7v2IO.HL7v2Read.FetchHL7v2Message.HL7v2MessageGetFn	DoFn for fetching messages from the HL7v2 store with error handling.
HL7v2IO.HL7v2Read.Result	The type Result includes PCollection of HL7v2ReadResponse objects for successfully read results and PCollection of HealthcareIOError objects for failed reads.
HL7v2IO.ListHL7v2Messages	List HL7v2 messages in HL7v2 Stores with optional filter.
HL7v2IO.Read	The type Read that reads HL7v2 message contents given a PCollection of message IDs strings.
HL7v2IO.Read.FetchHL7v2Message	PTransform to fetch a message from an Google Cloud Healthcare HL7v2 store based on msgID.
HL7v2IO.Read.FetchHL7v2Message.HL7v2MessageGetFn	DoFn for fetching messages from the HL7v2 store with error handling.
HL7v2IO.Read.Result	The type Result includes PCollection of HL7v2Message objects for successfully read results and PCollection of HealthcareIOError objects for failed reads.
HL7v2IO.Write	The type Write that writes the given PCollection of HL7v2 messages.
HL7v2IO.Write.Result
HL7v2Message	The type HL7v2 message to wrap the Message model.
HL7v2MessageCoder
HL7v2ReadParameter	HL7v2ReadParameter represents the read parameters for a HL7v2 read request, used as the input type for HL7v2IO.HL7v2Read.
HL7v2ReadResponse	HL7v2ReadResponse represents the response format for a HL7v2 read request, used as the output type of HL7v2IO.HL7v2Read.
HL7v2ReadResponseCoder	Coder for HL7v2ReadResponse.
HttpHealthcareApiClient	A client that talks to the Cloud Healthcare API through HTTP requests.
HttpHealthcareApiClient.AuthenticatedRetryInitializer
HttpHealthcareApiClient.FhirResourcePagesIterator	The type FhirResourcePagesIterator for methods which return paged output.
HttpHealthcareApiClient.HL7v2MessagePages
HttpHealthcareApiClient.HL7v2MessagePages.HL7v2MessagePagesIterator	The type Hl7v2 message id pages iterator.
JsonArrayCoder
WebPathParser
WebPathParser.DicomWebPath

Enum Summary

Enum	Description
FhirIO.Import.ContentStructure	The enum Content structure.
FhirIO.Write.WriteMethod	The enum Write method.
HL7v2IO.Write.WriteMethod	The enum Write method.
HttpHealthcareApiClient.FhirResourcePagesIterator.FhirMethod

Exception Summary

Exception	Description
HttpHealthcareApiClient.HealthcareHttpException	Wraps HttpResponse in an exception with a statusCode field for use with HealthcareIOError.