Deprecated API

Contents

• Deprecated Classes
• Deprecated Methods

Deprecated Classes

Class and Description
org.openscience.cdk.layout.OverlapResolver does not resolve overlaps correctly

Deprecated Methods

Method and Description
org.openscience.cdk.layout.StructureDiagramGenerator.generateExperimentalCoordinates() use StructureDiagramGenerator.generateCoordinates()
org.openscience.cdk.layout.StructureDiagramGenerator.generateExperimentalCoordinates(Vector2d) use StructureDiagramGenerator.generateCoordinates()
org.openscience.cdk.layout.StructureDiagramGenerator.getTemplateHandler() always null, substructure templates are not used anymore
org.openscience.cdk.layout.StructureDiagramGenerator.getUseTemplates() always false, substructure templates are not used anymore
org.openscience.cdk.layout.StructureDiagramGenerator.setBondLength(double) use GeometryUtil.scaleMolecule(IAtomContainer, double)
org.openscience.cdk.layout.StructureDiagramGenerator.setTemplateHandler(TemplateHandler) substructure templates are no longer used for layout but those provided here will be converted to identity templates
org.openscience.cdk.layout.StructureDiagramGenerator.setUseTemplates(boolean) always false, substructure templates are not used anymore
org.openscience.cdk.layout.AtomPlacer.shouldBeLinear(IAtom, IAtomContainer)