Hierarchy For All Packages

Package Hierarchies:

• org.openscience.cdk.dict,
• org.openscience.cdk.geometry,
• org.openscience.cdk.io,
• org.openscience.cdk.io.cml,
• org.openscience.cdk.io.iterator,
• org.openscience.cdk.io.iterator.event,
• org.openscience.cdk.io.listener,
• org.openscience.cdk.io.program,
• org.openscience.cdk.io.pubchemxml

Class Hierarchy

• java.lang.Object
  • org.openscience.cdk.io.ChemObjectIO (implements org.openscience.cdk.io.IChemObjectIO)
    • org.openscience.cdk.io.DefaultChemObjectReader (implements org.openscience.cdk.io.ISimpleChemObjectReader)
      • org.openscience.cdk.io.CIFReader
      • org.openscience.cdk.io.CMLReader
      • org.openscience.cdk.io.CTXReader
      • org.openscience.cdk.io.Gaussian03Reader
      • org.openscience.cdk.io.Gaussian98Reader
      • org.openscience.cdk.io.GhemicalMMReader
      • org.openscience.cdk.io.HINReader
      • org.openscience.cdk.io.Mol2Reader
      • org.openscience.cdk.io.Mopac7Reader
      • org.openscience.cdk.io.PCCompoundASNReader
      • org.openscience.cdk.io.PCCompoundXMLReader
      • org.openscience.cdk.io.PCSubstanceXMLReader
      • org.openscience.cdk.io.PMPReader
      • org.openscience.cdk.io.ShelXReader
      • org.openscience.cdk.io.XYZReader
    • org.openscience.cdk.io.DefaultChemObjectWriter (implements org.openscience.cdk.io.IChemObjectWriter)
      • org.openscience.cdk.io.CDKSourceCodeWriter
      • org.openscience.cdk.io.program.GaussianInputWriter
      • org.openscience.cdk.io.HINWriter
      • org.openscience.cdk.io.Mol2Writer
      • org.openscience.cdk.io.program.Mopac7Writer
      • org.openscience.cdk.io.XYZWriter
    • org.openscience.cdk.io.iterator.event.DefaultEventChemObjectReader (implements org.openscience.cdk.io.iterator.event.IEventChemObjectReader)
      • org.openscience.cdk.io.iterator.event.EventCMLReader
    • org.openscience.cdk.io.iterator.DefaultIteratingChemObjectReader<T> (implements org.openscience.cdk.io.iterator.IIteratingChemObjectReader<T>)
      • org.openscience.cdk.io.iterator.IteratingPCCompoundASNReader
      • org.openscience.cdk.io.iterator.IteratingPCCompoundXMLReader
      • org.openscience.cdk.io.iterator.IteratingPCSubstancesXMLReader
  • org.openscience.cdk.io.cml.CMLCoreModule (implements org.openscience.cdk.io.cml.ICMLModule)
    • org.openscience.cdk.io.cml.CDKConvention
    • org.openscience.cdk.io.cml.CMLReactionModule
    • org.openscience.cdk.io.cml.JMOLANIMATIONConvention
    • org.openscience.cdk.io.cml.MDLMolConvention
    • org.openscience.cdk.io.cml.PDBConvention
    • org.openscience.cdk.io.cml.PMPConvention
    • org.openscience.cdk.io.cml.QSARConvention
  • org.openscience.cdk.io.cml.CMLErrorHandler (implements org.xml.sax.ErrorHandler)
  • org.openscience.cdk.io.cml.CMLModuleStack
  • org.openscience.cdk.io.cml.CMLResolver (implements org.xml.sax.EntityResolver)
  • org.xml.sax.helpers.DefaultHandler (implements org.xml.sax.ContentHandler, org.xml.sax.DTDHandler, org.xml.sax.EntityResolver, org.xml.sax.ErrorHandler)
    • org.openscience.cdk.io.cml.CMLHandler
      • org.openscience.cdk.io.iterator.event.EventCMLHandler
  • org.openscience.cdk.dict.DictRef (implements java.lang.Cloneable, java.io.Serializable)
  • org.openscience.cdk.io.pubchemxml.PubChemXMLHelper
  • org.openscience.cdk.io.ReaderFactory
  • org.openscience.cdk.io.listener.SwingGUIListener (implements org.openscience.cdk.io.listener.IReaderListener, org.openscience.cdk.io.listener.IWriterListener)
  • org.openscience.cdk.io.listener.TextGUIListener (implements org.openscience.cdk.io.listener.IReaderListener, org.openscience.cdk.io.listener.IWriterListener)
  • org.openscience.cdk.io.WriterFactory
  • org.openscience.cdk.geometry.ZMatrixTools

Interface Hierarchy

• org.openscience.cdk.io.cml.ICMLModule
  • org.openscience.cdk.io.cml.ICMLConvention