Package org.openscience.cdk.io

Class Summary

Class	Description
CDKSourceCodeWriter	Converts a Molecule into CDK source code that would build the same molecule.
CIFReader	This is not a reader for the CIF and mmCIF crystallographic formats.
CMLReader	Reads a molecule in CML 1.x and 2.0 format.
CTXReader	Reader that extracts information from the IDENT, NAME, ATOMS and BONDS blocks in CTX files.
Gaussian03Reader	A reader for Gaussian03 output.
Gaussian98Reader	A reader for Gaussian98 output.
GhemicalMMReader	Reads Ghemical ( http://www.uku.fi/~thassine/ghemical/) molecular mechanics (*.mm1gp) files.
HINReader	Reads an object from HIN formated input.
HINWriter	Writer that outputs in the HIN format.
Mol2Reader	Reads a molecule from an Mol2 file, such as written by Sybyl.
Mol2Writer	An output Writer that writes molecular data into the Tripos Mol2 format.
Mopac7Reader	Reads MOPAC output, extracts several electronic parameters and assigns them as a molecule properties.
PCCompoundASNReader	Reads an object from ASN formated input for PubChem Compound entries.
PCCompoundXMLReader	Reads an object from ASN.1 XML formated input for PubChem Compound entries.
PCSubstanceXMLReader	Reads an object from ASN formated input for PubChem Compound entries.
PMPReader	Reads an frames from a PMP formated input.
ReaderFactory	A factory for creating ChemObjectReaders.
ShelXReader	A reader for ShelX output (RES) files.
WriterFactory	Helper tool to create IChemObjectWriters.
XYZReader	Reads an object from XYZ formated input.
XYZWriter