Hierarchy For All Packages

Package Hierarchies:

• ch.epfl.bbp.uima,
• ch.epfl.bbp.uima.ae,
• ch.epfl.bbp.uima.ae.cleanup,
• ch.epfl.bbp.uima.ae.output,
• ch.epfl.bbp.uima.ae.relations,
• ch.epfl.bbp.uima.ae.serialization,
• ch.epfl.bbp.uima.annotationviewer,
• ch.epfl.bbp.uima.cr,
• ch.epfl.bbp.uima.filter,
• ch.epfl.bbp.uima.io,
• ch.epfl.bbp.uima.testutils,
• ch.epfl.bbp.uima.uimafit,
• ch.epfl.bbp.uima.utils,
• ch.epfl.bbp.uima.validation,
• ch.epfl.bbp.uima.word2vec,
• ds.tree,
• javatools.parsers,
• org.apache.uima.fit.component.xwriter

Class Hierarchy

• java.lang.Object
  • java.util.AbstractCollection<E> (implements java.util.Collection<E>)
    • java.util.AbstractList<E> (implements java.util.List<E>)
      • javatools.parsers.FinalSet<T> (implements java.util.Set<E>)
  • java.util.AbstractMap<K,V> (implements java.util.Map<K,V>)
    • java.util.TreeMap<K,V> (implements java.lang.Cloneable, java.util.NavigableMap<K,V>, java.io.Serializable)
      • javatools.parsers.FinalMap<T1,T2>
  • ch.epfl.bbp.uima.validation.AlternateTestEvaluator<T>
  • org.apache.uima.analysis_component.AnalysisComponent_ImplBase (implements org.apache.uima.analysis_component.AnalysisComponent)
    • org.apache.uima.analysis_component.Annotator_ImplBase
      • org.apache.uima.analysis_component.JCasAnnotator_ImplBase
        • org.apache.uima.fit.component.JCasAnnotator_ImplBase
          • ch.epfl.bbp.uima.filter.AnnotationFilterAnnotator
          • ch.epfl.bbp.uima.ae.output.AnnotationHistogramAnnotator
          • ch.epfl.bbp.uima.ae.output.AnnotationInstanceHistogramAnnotator
          • ch.epfl.bbp.uima.ae.output.AnnotationTypeWriter
            • ch.epfl.bbp.uima.ae.output.AnnotationTypeWriter2
          • ch.epfl.bbp.uima.ae.output.BartWriter
          • ch.epfl.bbp.uima.ae.serialization.BinaryCasWriter
          • ch.epfl.bbp.uima.annotationviewer.BlueAnnotationViewerAnnotator
          • ch.epfl.bbp.uima.ae.relations.CooccurrencesEvaluationAnnotator
          • ch.epfl.bbp.uima.ae.relations.CooccurrencesEvaluationAnnotator2
          • ch.epfl.bbp.uima.ae.CopyAnnotationsAnnotator
          • ch.epfl.bbp.uima.ae.CopyAnnotationsAnnotator2
          • ch.epfl.bbp.uima.ae.output.CountAnnotations
          • ch.epfl.bbp.uima.ae.output.CountAnnotationsAnnotator
          • ch.epfl.bbp.uima.validation.CrossvalidationWriter
          • ch.epfl.bbp.uima.ae.DeduplicatorAnnotator
          • ch.epfl.bbp.uima.ae.output.DocumentTextWriter
          • ch.epfl.bbp.uima.ae.DotSentenceSplitterAnnotator
          • ch.epfl.bbp.uima.ae.output.Dumper
          • ch.epfl.bbp.uima.ae.output.DumpTokensWriter
          • ch.epfl.bbp.uima.ae.output.DumpTopics
          • ch.epfl.bbp.uima.ae.EnsureDocHasHeader
          • ch.epfl.bbp.uima.ae.EnsureDocHasOneSentence
          • ch.epfl.bbp.uima.ae.EnsureDocTextNotNullAnnotator
          • ch.epfl.bbp.uima.ae.EnsureTokensHaveLemmaAndPOS
          • ch.epfl.bbp.uima.ae.EntityNormalizerAnnotator
          • ch.epfl.bbp.uima.filter.EtAlAnnotator
          • ch.epfl.bbp.uima.ae.EvaluationAnnotator
          • ch.epfl.bbp.uima.ae.EvaluationPreprocessorAnnotator
          • ch.epfl.bbp.uima.ae.relations.ExtractCoocurrences
            • ch.epfl.bbp.uima.ae.relations.ExtractCoocurrencesFilterDistance
            • ch.epfl.bbp.uima.ae.relations.ExtractSameCoocurrences
          • ch.epfl.bbp.uima.ae.relations.FilterCoocurrencesByDistance
          • ch.epfl.bbp.uima.ae.relations.FilterCoocurrencesByNot
          • ch.epfl.bbp.uima.ae.relations.FilterCoocurrencesByStopwords
          • ch.epfl.bbp.uima.ae.relations.FilterCoocurrencesByTriggerword
          • ch.epfl.bbp.uima.ae.relations.FilterCoocurrencesIfTooManyEntities
          • ch.epfl.bbp.uima.ae.relations.FilterCoocurrencesInLongSentences
          • ch.epfl.bbp.uima.ae.relations.FilterInactiveCooccurrencesAnnotator
          • ch.epfl.bbp.uima.filter.FrequencyFilterAnnotator
          • ch.epfl.bbp.uima.filter.FrequencyFilterWriter
          • ch.epfl.bbp.uima.ae.GarbageCollectorAnnotator
          • ch.epfl.bbp.uima.ae.GeneralEnglishAnnotator
          • ch.epfl.bbp.uima.ae.GridSearchConfiguration
          • ch.epfl.bbp.uima.ae.output.HtmlViewerWriter
          • ch.epfl.bbp.uima.ae.KeepLargestAnnotationAnnotator
          • ch.epfl.bbp.uima.filter.KeepsCleaner
          • ch.epfl.bbp.uima.filter.KeepsDumper
          • ch.epfl.bbp.uima.filter.KeepsWriter
          • ch.epfl.bbp.uima.ae.output.LdaCWriter
          • ch.epfl.bbp.uima.filter.LeaveOnlyKeepsEnclosedAnnotationsAnnotator
          • ch.epfl.bbp.uima.ae.LucasHelperAnnotator
          • ch.epfl.bbp.uima.filter.MeasureNormalizerAnnotator
          • ch.epfl.bbp.uima.ae.MultipleProteinsAnnotator
          • ch.epfl.bbp.uima.ae.NaiveSentenceSplitterAnnotator
          • ch.epfl.bbp.uima.ae.NewlineSentenceSplitterAnnotator
          • ch.epfl.bbp.uima.ae.output.PrintAnnotationInSentenceWriter
          • ch.epfl.bbp.uima.ae.PunctuationAnnotator
          • ch.epfl.bbp.uima.filter.PunctuationFilterAnnotator
          • ch.epfl.bbp.uima.filter.ReferencesFinderAnnotator
          • ch.epfl.bbp.uima.ae.RegexTokenizerAnnotator
          • ch.epfl.bbp.uima.ae.RemoveAnnotationsAnnotator
          • ch.epfl.bbp.uima.filter.SectionAnnotator
          • ch.epfl.bbp.uima.filter.SectionFilterAnnotator
          • ch.epfl.bbp.uima.filter.SectionRegexAnnotator
          • ch.epfl.bbp.uima.ae.output.SentenceDumpAnnotator
          • ch.epfl.bbp.uima.filter.SentenceFilterAnnotator
          • ch.epfl.bbp.uima.filter.SimpleNormalizerAnnotator
          • ch.epfl.bbp.uima.ae.SkipSomePosAnnotator
          • ch.epfl.bbp.uima.ae.cleanup.SkipSomePosAnnotator2
          • ch.epfl.bbp.uima.ae.SnowballAnnotator
          • ch.epfl.bbp.uima.filter.SnowballStemmerNormalizerAnnotator
          • ch.epfl.bbp.uima.ae.output.SplitInPages
          • ch.epfl.bbp.uima.ae.StaticConfiguration
          • ch.epfl.bbp.uima.ae.StatsAnnotatorPlus
          • ch.epfl.bbp.uima.ae.output.StatsTextAnnotator
          • ch.epfl.bbp.uima.filter.StopwordFilterAnnotator
          • ch.epfl.bbp.uima.ae.output.SysoutDumper
          • ch.epfl.bbp.uima.ae.TestAnnotator
          • ch.epfl.bbp.uima.filter.Tokens2KeepAnnotator
          • ch.epfl.bbp.uima.ae.cleanup.TooFewTokensFilterAnnotator
          • ch.epfl.bbp.uima.filter.TooFewTokensFilterAnnotator
          • ch.epfl.bbp.uima.ae.cleanup.TooMuchOOVFilterAnnotator
          • ch.epfl.bbp.uima.filter.TooMuchOOVFilterAnnotator
          • ch.epfl.bbp.uima.ae.WhitespaceTokenizerAnnotator
          • ch.epfl.bbp.uima.ae.relations.WriteCoocurrencesToLoadfile
          • ch.epfl.bbp.uima.ae.relations.WriteCoocurrencesToLoadfile2
          • ch.epfl.bbp.uima.ae.relations.WriteCoocurrencesToLoadfile3
        • org.apache.uima.fit.component.JCasConsumer_ImplBase
          • ch.epfl.bbp.uima.ae.output.XWriter
          • ch.epfl.bbp.uima.ae.output.ZipXWriter
  • ch.epfl.bbp.uima.annotationviewer.BlueAnnotationViewer
  • ch.epfl.bbp.uima.annotationviewer.BlueAnnotationViewGenerator
  • ch.epfl.bbp.uima.BlueCasUtil
  • ch.epfl.bbp.uima.BlueUima
  • ch.epfl.bbp.uima.utils.ConceptFileWriter
  • ch.epfl.bbp.uima.utils.ConceptFileWriter.Concept
  • ch.epfl.bbp.uima.uimafit.CpeBuilder (implements ch.epfl.bbp.uima.uimafit.PipelineBuilder)
  • ch.epfl.bbp.uima.utils.DataTableUtils
  • ch.epfl.bbp.uima.io.DirectoryIterator
    • ch.epfl.bbp.uima.io.DefaultDirectoryIterator
    • ch.epfl.bbp.uima.io.LargeDirectoryIterator
    • ch.epfl.bbp.uima.io.ZipDirectoryIterator
  • ch.epfl.bbp.uima.ae.cleanup.DisambiguatorAnnotator
  • ch.epfl.bbp.uima.utils.ExtractAbbrev
  • ch.epfl.bbp.uima.filter.FilterFrameworkUtils
  • org.apache.uima.fit.component.xwriter.HeaderDocIdFileNamer (implements org.apache.uima.fit.component.xwriter.XWriterFileNamer)
  • org.apache.uima.fit.component.xwriter.IntegerFileNamer (implements org.apache.uima.fit.factory.initializable.Initializable, org.apache.uima.fit.component.xwriter.XWriterFileNamer)
  • ch.epfl.bbp.uima.uimafit.JcasPipelineBuilder (implements ch.epfl.bbp.uima.uimafit.PipelineBuilder)
  • ch.epfl.bbp.uima.ae.output.LdaCWriter.Writer
  • ch.epfl.bbp.uima.utils.MyDumpWriter
  • ch.epfl.bbp.uima.utils.PlingStemmer (implements org.apache.uima.conceptMapper.support.stemmer.Stemmer)
  • javatools.parsers.PlingStemmer
  • ch.epfl.bbp.uima.utils.Preconditions
  • ds.tree.RadixTreeImpl<T> (implements java.util.Formattable, ds.tree.RadixTree<T>)
  • org.apache.uima.resource.Resource_ImplBase (implements org.apache.uima.resource.Resource)
    • org.apache.uima.resource.ConfigurableResource_ImplBase (implements org.apache.uima.resource.ConfigurableResource)
      • org.apache.uima.collection.CollectionReader_ImplBase (implements org.apache.uima.collection.CollectionReader)
        • ch.epfl.bbp.uima.cr.AggregateCollectionReader
        • org.apache.uima.fit.component.JCasCollectionReader_ImplBase
          • ch.epfl.bbp.uima.cr.AbstractFileReader
            • ch.epfl.bbp.uima.ae.serialization.BinaryCasReader
            • ch.epfl.bbp.uima.cr.FileReader
            • ch.epfl.bbp.uima.cr.TextFileReader
            • ch.epfl.bbp.uima.cr.XCollectionReader
            • ch.epfl.bbp.uima.cr.ZipXmiCollectionReader
          • ch.epfl.bbp.uima.cr.ConcatReader
          • ch.epfl.bbp.uima.validation.CrossvalidationReader
          • ch.epfl.bbp.uima.cr.FromFilelistReader
          • ch.epfl.bbp.uima.cr.LdaCReader
          • ch.epfl.bbp.uima.cr.OneDocPerLineIdsReader
          • ch.epfl.bbp.uima.cr.OneDocPerLineReader
            • ch.epfl.bbp.uima.cr.OneDocPerLineReader2
          • ch.epfl.bbp.uima.cr.OneDocPerLineReader3
          • ch.epfl.bbp.uima.ae.serialization.RangeBinaryCasReader
          • ch.epfl.bbp.uima.cr.SingleAbstractReader
          • ch.epfl.bbp.uima.cr.SingleFileReader
          • ch.epfl.bbp.uima.cr.TextArrayReader
          • ch.epfl.bbp.uima.cr.TextLineReader
          • ch.epfl.bbp.uima.cr.TextReader
  • ch.epfl.bbp.uima.utils.Resources
  • ch.epfl.bbp.uima.utils.SCharsStemmer (implements org.apache.uima.conceptMapper.support.stemmer.Stemmer)
  • ch.epfl.bbp.uima.utils.SilentMallet
  • ch.epfl.bbp.uima.uimafit.SimplePipelineBuilder (implements ch.epfl.bbp.uima.uimafit.PipelineBuilder)
  • ch.epfl.bbp.uima.utils.SnowballStemmer (implements org.apache.uima.conceptMapper.support.stemmer.Stemmer)
  • ch.epfl.bbp.uima.utils.StaticOption
  • ch.epfl.bbp.uima.uimafit.StatusCallbackListenerSlf4J (implements org.apache.uima.collection.StatusCallbackListener)
  • ch.epfl.bbp.uima.utils.StopwatchUtils
  • ch.epfl.bbp.uima.utils.StructuredDirectory
  • ch.epfl.bbp.uima.validation.TestEvaluator<T,U>
  • ch.epfl.bbp.uima.validation.TestResult
  • ch.epfl.bbp.io.TextFileWriter (implements java.io.Closeable)
    • ch.epfl.bbp.uima.utils.LoadDataFileWriter
  • java.lang.Throwable (implements java.io.Serializable)
    • java.lang.Exception
      • java.lang.RuntimeException
        • ds.tree.DuplicateKeyException
  • ch.epfl.bbp.uima.testutils.UimaTests
  • ch.epfl.bbp.uima.validation.ValidationUtils
  • ds.tree.VisitorImpl<T,R> (implements ds.tree.Visitor<T,R>)
  • ch.epfl.bbp.uima.word2vec.Word2Vec
    • ch.epfl.bbp.uima.word2vec.Word2VecMore
  • ch.epfl.bbp.uima.word2vec.Word2Vec.WordEntry (implements java.lang.Comparable<T>)
  • ch.epfl.bbp.uima.word2vec.Word2VecUtils

Interface Hierarchy

• ch.epfl.bbp.uima.validation.Comparator<T,U>
• ch.epfl.bbp.uima.uimafit.PipelineBuilder
• ds.tree.RadixTree<T>
• ds.tree.Visitor<T,R>
• org.apache.uima.fit.component.xwriter.XWriterFileNamer

Annotation Type Hierarchy

• ch.epfl.bbp.uima.ScriptingShortcut (implements java.lang.annotation.Annotation)

Enum Hierarchy

• java.lang.Object
  • java.lang.Enum<E> (implements java.lang.Comparable<T>, java.io.Serializable)
    • ch.epfl.bbp.uima.BlueCasUtil.Position
    • ch.epfl.bbp.uima.utils.StaticOption.Type