ch.epfl.bbp.uima.ae.relations

Class ExtractCoocurrencesFilterDistance

java.lang.Object

org.apache.uima.analysis_component.AnalysisComponent_ImplBase

org.apache.uima.analysis_component.Annotator_ImplBase

org.apache.uima.analysis_component.JCasAnnotator_ImplBase

org.apache.uima.fit.component.JCasAnnotator_ImplBase

ch.epfl.bbp.uima.ae.relations.ExtractCoocurrences

ch.epfl.bbp.uima.ae.relations.ExtractCoocurrencesFilterDistance

All Implemented Interfaces:

org.apache.uima.analysis_component.AnalysisComponent

Deprecated.

@Deprecated
public class ExtractCoocurrencesFilterDistance
extends ExtractCoocurrences

Extracts cooccurrences, filtering by maximum distance.
Use FilterCoocurrencesByDistance instead.

Author:

renaud.richardet@epfl.ch

Field Summary

Fields

Modifier and Type	Field and Description
protected static org.slf4j.Logger	LOG Deprecated.
protected int	maximumDistance Deprecated.
static String	PARAM_MAXIMUM_DISTANCE Deprecated.

Fields inherited from class ch.epfl.bbp.uima.ae.relations.ExtractCoocurrences

annotation1, annotation2, annotationStr1, annotationStr2, cooccurrenceType, enclosingScope, enclosingScopeStr, firstIdFields, firstIdFieldsRaw, firstIdMethods, keepOnlyNearestNeighbors, PARAM_KEEP_ONLY_NEAREST_NEIGHBORS, secondIdFields, secondIdFieldsRaw, secondIdMethods

Constructor Summary

Constructors

Constructor and Description
ExtractCoocurrencesFilterDistance() Deprecated.

Method Summary

Methods

Modifier and Type	Method and Description
protected Cooccurrence	filterCooccurence(org.apache.uima.jcas.JCas jCas, org.apache.uima.jcas.tcas.Annotation enclosingAnnot, org.apache.uima.jcas.tcas.Annotation annot1, org.apache.uima.jcas.tcas.Annotation annot2, String[] ids1, String[] ids2) Deprecated. Adds all cooccurrences (no filtering).

Methods inherited from class ch.epfl.bbp.uima.ae.relations.ExtractCoocurrences

initialize, process

Methods inherited from class org.apache.uima.fit.component.JCasAnnotator_ImplBase

getLogger

Methods inherited from class org.apache.uima.analysis_component.JCasAnnotator_ImplBase

getRequiredCasInterface, process

Methods inherited from class org.apache.uima.analysis_component.Annotator_ImplBase

getCasInstancesRequired, hasNext, next

Methods inherited from class org.apache.uima.analysis_component.AnalysisComponent_ImplBase

batchProcessComplete, collectionProcessComplete, destroy, getContext, getResultSpecification, reconfigure, setResultSpecification

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

LOG

protected static org.slf4j.Logger LOG

Deprecated.

PARAM_MAXIMUM_DISTANCE

public static final String PARAM_MAXIMUM_DISTANCE

Deprecated.

See Also:

Constant Field Values

maximumDistance

protected int maximumDistance

Deprecated.

Constructor Detail

ExtractCoocurrencesFilterDistance

public ExtractCoocurrencesFilterDistance()

Deprecated.

Method Detail

filterCooccurence

protected Cooccurrence filterCooccurence(org.apache.uima.jcas.JCas jCas,
                             org.apache.uima.jcas.tcas.Annotation enclosingAnnot,
                             org.apache.uima.jcas.tcas.Annotation annot1,
                             org.apache.uima.jcas.tcas.Annotation annot2,
                             String[] ids1,
                             String[] ids2)

Deprecated.

Adds all cooccurrences (no filtering). Subclasses can implement finer filtering.

Overrides:

filterCooccurence in class ExtractCoocurrences

Parameters:

jCas -

enclosingAnnot -

annot1 -

annot2 -

ids1 -

ids2 -